RegionDefinition-class - S4 class defining a region definition

Description

RegionDefinition defines a common data structure for defining the region boundaries of an Ig sequence.

Slots

name
name of the RegionDefinition.
description
description of the model and its source.
boundaries
factor defining the region boundaries of the sequence. The levels and values of boundaries determine the number of regions.
seqLength
length of the sequence.
regions
levels of the boundaries; e.g, c("CDR", "FWR").
labels
labels for the boundary and mutations combinations; e.g., c("CDR_R", "CDR_S", "FWR_R", "FWR_S").
citation
publication source.

See also

See IMGT_SCHEMES for a set of predefined RegionDefinition objects.