MutabilityModel-class - S4 class defining a mutability model

Description

MutabilityModel defines a data structure for the 5-mer motif-based SHM targeting mutability model.

Usage

"print"(x)
"as.data.frame"(x)

Arguments

x
MutabilityModel object.

Slots

.Data
numeric vector containing 5-mer mutability estimates
source
character vector annotating whether the mutability was inferred or directly measured.
numMutS
a number indicating the number of silent mutations used for estimating mutability
numMutR
a number indicating the number of replacement mutations used for estimating mutability