RegionDefinition-class - S4 class defining a region definition
Description¶
RegionDefinition
defines a common data structure for defining the region
boundaries of an Ig sequence.
Slots¶
name
- name of the RegionDefinition.
description
- description of the model and its source.
boundaries
factor
defining the region boundaries of the sequence. The levels and values ofboundaries
determine the number of regions.seqLength
- length of the sequence.
regions
- levels of the boundaries; e.g,
c("cdr", "fwr")
. labels
- labels for the boundary and mutations combinations;
e.g.,
c("cdr_r", "cdr_s", "fwr_r", "fwr_s")
. citation
- publication source.
See also¶
See IMGT_SCHEMES for a set of predefined RegionDefinition
objects.